Creates a forest plot to visualise partial genetic correlation results
Source:R/other_functions.R
forest_plot.RdCreates a forest plot to visualise partial genetic correlation results
Usage
forest_plot(
obj,
save_file = F,
file_name = NULL,
file_width = NULL,
conditions = NULL,
pairs = NULL,
order = "difference"
)Arguments
- obj
an object containing the output from a call to
partial_ldsc()- save_file
Should the graphic should be saved?
default=FALSE, graphic will be displayed on the on-screen device (logical)- file_name
The name of the file to be saved (if
save_fileisTRUE),default=NULL, will use <forest_plot.jpeg>, extensions allowed are ".jpeg"/".pdf"/".tiff" (character)- file_width
The width of the figure to be saved (if
save_fileisTRUE), to help with readability if the conditions' names are too long,default=NULL(numeric)- conditions
The names of the conditions to be included,
default=NULL, will use all conditions and all corresponding pairs, a maximum of 8 conditions (character)- pairs
The names of the pairs to be included,
default=NULL, if provided, will overruleconditions, a maximum of 30 pairs (character)- order
How to order the conditions, possibility to use the difference (
"difference"), the unadjusted genetic correlation ("unadjusted"), or the partial genetic correlation ("partial"),default="difference"(character)